BCDPi-Predictor:The bioconcentration factor (BCF) predictor using Deep Neural Network Model

Abstract

Predicting the bioconcentration of chemical compounds is essential for assessing environmental risks and potential toxicological impacts. The bioconcentration factor (BCF) is a key parameter used to quantify the extent of bioconcentration. It represents the ratio of the concentration of a substance in an organism to its concentration in the surrounding water at equilibrium. Herein, we developed a robust multitask deep learning model using a binary-tree strategy to classify compounds into three bioconcentration categories including non-bioaccumulative (nBC, with BCF value < 500L/kg), weak bioaccumulative (weak-BC, with 500L/kg ≤ BCF value < 5000L/kg), and strong bioaccumulative (strong-BC, BCF value ≥ 5000L/kg). The model exhibited excellent predictive performance, achieving over 90% accuracy and an area under the curve (AUC) value of 0.95 for each binary classification task. The final ternary classification model attained an overall accuracy of 91.11%, with particularly high accuracy for non-BC and strong-BC compounds.

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